STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_006553Putative amino-acid permease C11D3.08c. (529 aa)    
Predicted Functional Partners:
LKA1_1
Alpha-amylase 1.
    
 0.557
mok13
Cell wall alpha-1,3-glucan synthase mok13.
    
 0.557
ALKBH2_1
DNA oxidative demethylase ALKBH2.
    
 0.557
AMT6
Glucan 1,4-alpha-maltohexaosidase.
    
 0.557
aml
Alpha-amylase.
    
 0.557
mal1
Alpha-glucosidase.
    
 0.557
ALKBH2_0
DNA oxidative demethylase ALKBH2.
    
 0.557
LKA1_0
Alpha-amylase 1.
    
 0.557
Hypma_005562
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
   
 0.528
Hypma_008390
Protein kinase domain-containing protein.
    
 0.521
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.