STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMN7Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (629 aa)    
Predicted Functional Partners:
ncs1
Calcium-binding protein NCS-1.
 
      0.663
plpp5
Phospholipid phosphatase 5.
    
   0.564
LPP3_1
Putative lipid phosphate phosphatase 3, chloroplastic.
    
   0.564
LPP3_0
Putative lipid phosphate phosphatase 3, chloroplastic.
    
   0.564
Hypma_010339
Uncharacterized protein.
    
   0.541
plyE_1
Putative pectate lyase E.
 
      0.536
TMS1
Membrane protein TMS1.
 
      0.527
Hypma_007451
L-type lectin-like domain-containing protein.
   
 
 0.518
qrs1
Putative glutamine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
      0.502
ERV25
Endoplasmic reticulum vesicle protein 25.
   
  
 0.488
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.