STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_0090733,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. (261 aa)    
Predicted Functional Partners:
rib5
Riboflavin synthase.
 0.994
Hypma_011833
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
 
 
 0.984
rib1
Putative GTP cyclohydrolase-2.
 
   
 0.970
RIB7
2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase.
  
  
 0.832
BUD4
Bud site selection protein BUD4.
  
 0.813
crn1
Coronin; Belongs to the WD repeat coronin family.
  
 0.813
Chmp5
Charged multivesicular body protein 5.
 
      0.767
FMN1
Riboflavin kinase.
    
 0.744
folE
GTP cyclohydrolase 1.
   
 
 0.737
PAN6
Pantoate--beta-alanine ligase.
    
 0.737
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.