STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_008099Uncharacterized protein. (195 aa)    
Predicted Functional Partners:
TRP-1
Tryptophan synthase.
    
 0.901
atp3
ATP synthase subunit gamma.
    
  0.727
TYR1
Prephenate dehydrogenase [NADP(+)].
    
  0.705
atp-1
ATP synthase subunit alpha, mitochondrial.
     
 0.699
shmt2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
     
 0.695
Hypma_004663
Uncharacterized protein.
    
 0.693
cysM
Cysteine synthase B.
    
 0.693
Cbs
Cystathionine beta-synthase.
    
 0.693
cysB_0
Cysteine synthase 1.
    
 0.690
cys12
Cysteine synthase 2.
    
 0.690
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.