STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppi1_1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (162 aa)    
Predicted Functional Partners:
sbp1
Ran-specific GTPase-activating protein 1.
 
 
 
 0.923
PRPF19
Pre-mRNA-processing factor 19.
    
 0.787
PRP45
Pre-mRNA-processing protein 45.
    
 0.786
SYF1
Pre-mRNA-splicing factor SYF1.
    
 0.786
spi1
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.780
BUD31
Protein BUD31.
    
 0.775
Hypma_015604
Uncharacterized protein.
   
 0.771
SLT11
Pre-mRNA-splicing factor SLT11.
   
  0.767
Hypma_011219
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.756
wos2
Protein wos2.
   
 0.756
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.