STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_016019HNHc domain-containing protein. (388 aa)    
Predicted Functional Partners:
CEF1
Pre-mRNA-splicing factor CEF1.
    
   0.805
EAF6
Chromatin modification-related protein EAF6.
    
 0.761
TRA1_1
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
   
 0.643
taf6
Transcription initiation factor TFIID subunit 6.
    
 0.639
SWC4
SWR1-complex protein 4.
    
 0.619
snt2
Lid2 complex component snt2.
    
 0.612
BRPF1
Peregrin.
    
 0.612
HAT2
Histone acetyltransferase type B subunit 2.
    
 0.592
Hypma_000732
Uncharacterized protein.
    
 0.574
Tip60
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.574
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.