STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_005294APH domain-containing protein. (244 aa)    
Predicted Functional Partners:
UBC12
NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.642
culA_1
Cullin-1; Belongs to the cullin family.
    
 0.628
culA_0
Cullin-1; Belongs to the cullin family.
    
 0.628
cul3
Cullin-3; Belongs to the cullin family.
    
 0.628
Hypma_015087
Uncharacterized protein.
    
 0.628
ned-8
NEDD8.
     
 0.598
Rbx1
E3 ubiquitin-protein ligase RBX1.
    
 0.595
nae1
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme.
     
 0.589
Hypma_001852
HTH myb-type domain-containing protein.
     
 0.476
Hypma_010090
Putative J domain-containing protein C2E1P5.03.
     
 0.476
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.