STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_015787Uncharacterized protein. (446 aa)    
Predicted Functional Partners:
CWC22
Pre-mRNA-splicing factor CWC22.
    
  0.954
SLU7
Pre-mRNA-splicing factor SLU7.
   
 0.891
prkrip1
PRKR-interacting protein 1.
    
 0.873
sde2
Telomere maintenance protein SDE2.
    
 0.873
syf2
Pre-mRNA-splicing factor syf2.
   
 0.866
Hypma_002565
Nkap_C domain-containing protein.
    
 0.843
CYP1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
  0.832
Ppie
Peptidyl-prolyl cis-trans isomerase E.
    
  0.726
FAL1
ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family.
    
 0.722
TIM22
Mitochondrial import inner membrane translocase subunit TIM22.
    
 0.706
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.