STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAL_1Phenylalanine ammonia-lyase. (736 aa)    
Predicted Functional Partners:
HIS4
Histidine biosynthesis trifunctional protein.
    
 0.820
Hypma_007962
Tyrosine decarboxylase 1.
     
 0.789
aga-1
Arginase; Belongs to the arginase family.
  
 
 0.780
Hypma_015927
Putative agmatinase 1; Belongs to the arginase family.
  
 
 0.780
AAT2
Aspartate aminotransferase.
   
 
 0.776
got2
Aspartate aminotransferase.
   
 
 0.775
CIA1
Probable cytosolic iron-sulfur protein assembly protein 1; Essential component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery. Required for the maturation of extramitochondrial Fe/S proteins.
    
 0.719
guaD_0
Guanine deaminase.
  
 
 0.699
guaD_1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
  
 
 0.699
Hypma_015053
Chorismate synthase.
  
 
 0.629
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.