STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_001499Uncharacterized protein. (585 aa)    
Predicted Functional Partners:
Rbbp5
Retinoblastoma-binding protein 5.
    
 0.649
ash2
Set1 complex component ash2.
    
 0.642
AMI1
Amidase 1.
    
 0.624
OEP64_1
Outer envelope protein 64, chloroplastic.
    
 0.624
Hypma_015741
Uncharacterized protein.
    
  0.624
Hypma_011219
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.617
Hypma_011646
Uncharacterized protein.
    
 0.616
Nup85
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.609
ATG1
Serine/threonine-protein kinase ATG1.
    
 0.609
SEC13
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.609
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.