STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D14TBC1 domain family member 14. (645 aa)    
Predicted Functional Partners:
RB11B
Ras-related protein Rab-11B.
    
 0.797
ATG1
Serine/threonine-protein kinase ATG1.
    
  0.704
trs85-1
Transport protein particle subunit trs85-1.
    
 
 0.635
TRAPPC12
Trafficking protein particle complex subunit 12.
    
 
 0.580
TRAPPC13
Trafficking protein particle complex subunit 13.
    
 
 0.567
TRAPPC2L
Trafficking protein particle complex subunit 2-like protein.
    
 
 0.558
trappc11
Trafficking protein particle complex subunit 11.
   
   0.557
trs31
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 
 0.553
ARF1
ADP-ribosylation factor 1.
    
 0.511
ARF3
ADP-ribosylation factor 3; Belongs to the small GTPase superfamily. Arf family.
    
 0.511
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.