STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plyE_0Pectate lyase E. (253 aa)    
Predicted Functional Partners:
plyF
Putative pectate lyase F.
  
  
 
0.710
plyA_1
Putative pectate lyase A.
  
  
 0.704
plyA_0
Putative pectate lyase A.
  
  
 0.703
plyA_2
Putative pectate lyase A.
  
  
  0.630
Rad51d
DNA repair protein RAD51 4.
     
 0.564
rhp51
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
     
 0.564
XRCC3
DNA repair protein XRCC3.
     
 0.448
dmc1
Meiotic recombination protein dmc1; Belongs to the RecA family.
     
 0.448
Rad51c
DNA repair protein RAD51 3.
     
 0.448
Hypma_001720
Uncharacterized protein.
     
 0.444
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.