STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC1Tetratricopeptide repeat protein 1. (258 aa)    
Predicted Functional Partners:
ppp1r7
Protein phosphatase 1 regulatory subunit 7.
   
    0.665
DUS1L_1
tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like.
 
      0.651
Hypma_000698
Uncharacterized protein C17C9.12.
    
 
 0.511
SGT1A
Protein SGT1 A.
   
  
 0.465
tom70
Mitochondrial import receptor subunit tom70.
      
 0.412
plp1
Thioredoxin domain-containing protein plp1.
   
   0.405
CBSCBSPB3
CBS domain-containing protein CBSCBSPB3.
      
 0.404
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.