STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_015610Uncharacterized protein. (232 aa)    
Predicted Functional Partners:
Hypma_011425
Brix domain-containing protein C1B9.03c.
   
 
 0.988
Hypma_006924
RRM domain-containing protein.
   
 
 0.988
SPBC9B6.07
Ribosomal RNA-processing protein 1.
   
 
 0.983
brx1
Ribosome biogenesis protein brx1.
   
 
 0.981
RPF1
Ribosome production factor 1.
   
 
 0.977
nog1
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.976
RRP14
Ribosomal RNA-processing protein 14.
   
 
 0.967
Hypma_015563
Uncharacterized protein.
   
 
 0.964
Hypma_005769
Ribosome production factor 2.
   
 
 0.961
WDR74
WD repeat-containing protein 74.
   
 
 0.953
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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