STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI13'-5' exoribonuclease 1. (222 aa)    
Predicted Functional Partners:
NPC2
Phosphatidylglycerol/phosphatidylinositol transfer protein.
 
      0.708
RPL19B
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
    
  0.647
Hypma_005292
60S ribosomal protein L38-1; Belongs to the eukaryotic ribosomal protein eL38 family.
     
 0.637
Hypma_009025
60S ribosomal protein L30-1.
     
 0.636
RpL8
60S ribosomal protein L8.
   
 
  0.628
TEX10
Testis-expressed sequence 10 protein.
   
 
  0.619
rpl401
60S ribosomal protein L4-B.
    
 0.615
rml2
54S ribosomal protein rml2, mitochondrial.
   
 
  0.576
Exosc5
Exosome complex component RRP46.
    
 0.576
exosc6
Exosome complex component MTR3.
    
 0.535
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.