STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_004304Uncharacterized protein. (967 aa)    
Predicted Functional Partners:
Ric1
RAB6A-GEF complex partner protein 1.
    
 0.984
RABH1B
Ras-related protein RABH1b.
    
 0.856
COG8
Conserved oligomeric Golgi complex subunit 8.
    
 0.781
COG6
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 0.769
tlg2
t-SNARE affecting a late Golgi compartment protein 2.
    
 0.743
VPS52
Vacuolar protein sorting-associated protein 52 A.
     
 0.740
ypt-1
GTP-binding protein ypt1.
    
 0.737
Arfrp1
ADP-ribosylation factor-related protein 1; Belongs to the small GTPase superfamily. Arf family.
    
  0.734
Hypma_001063
Uncharacterized protein.
    
  0.717
VPS53
Vacuolar protein sorting-associated protein 53.
     
 0.698
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.