STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAT10_0RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1056 aa)    
Predicted Functional Partners:
bms1
Ribosome biogenesis protein bms1.
   
 
 0.988
utp20
U3 small nucleolar RNA-associated protein 20.
   
 
 0.987
Hypma_010752
U3 small nucleolar RNA-associated protein 21.
   
 
 0.985
UTP10
U3 small nucleolar RNA-associated protein 10.
   
 
 0.985
Hypma_013957
Periodic tryptophan protein 2.
   
 
 0.985
RRP5
rRNA biogenesis protein RRP5.
   
 
 0.985
enp2
Ribosome biogenesis protein enp2.
   
 
 0.985
nop56
Nucleolar protein 56.
   
 
 0.984
NOP58
Nucleolar protein 58.
   
 
 0.984
Hypma_008513
Uncharacterized protein C57A7.06.
   
 
 0.983
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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