STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trs85-1Transport protein particle subunit trs85-1. (1337 aa)    
Predicted Functional Partners:
Trappc2
Trafficking protein particle complex subunit 2.
    
 0.996
trs31
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. BET3 subfamily.
    
 0.996
BET3
Trafficking protein particle complex subunit BET3.
    
 0.995
bet5
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.995
Trappc6b
Trafficking protein particle complex subunit 6B.
   
 0.994
trappc11
Trafficking protein particle complex subunit 11.
   
 0.990
trs23
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.989
TRAPPC2L
Trafficking protein particle complex subunit 2-like protein.
    
 0.988
TRAPPC12
Trafficking protein particle complex subunit 12.
    
 0.982
ypt-1
GTP-binding protein ypt1.
    
 0.981
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.