STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_00529260S ribosomal protein L38-1; Belongs to the eukaryotic ribosomal protein eL38 family. (83 aa)    
Predicted Functional Partners:
rpl-17
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 0.999
RPL31
60S ribosomal protein L31.
   
 0.999
RPL21A
60S ribosomal protein L21-A.
   
 0.999
Hypma_001693
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
   
 0.999
crp-74
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.999
RPS12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.999
RPL19B
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.999
RL25
60S ribosomal protein L25; Belongs to the universal ribosomal protein uL23 family.
   
 0.999
rpl502
60S ribosomal protein L5-B.
   
 0.999
RPL26B
60S ribosomal protein L26-2.
   
 0.999
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.