STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
puf6Pumilio y domain family member 6. (667 aa)    
Predicted Functional Partners:
Hypma_005769
Ribosome production factor 2.
   
 
 0.990
nog1
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.988
nop2
25S rRNA (Cytosine-C(5))-methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.987
ebp2
Putative rRNA-processing protein ebp2.
   
 
 0.983
Hypma_006103
Putative RNA-binding protein C4F6.14.
   
 
 0.981
MAK5
ATP-dependent RNA helicase MAK5; Belongs to the DEAD box helicase family.
   
 
 0.972
Hypma_006924
RRM domain-containing protein.
   
 
 0.969
brx1
Ribosome biogenesis protein brx1.
   
 
 0.968
Hypma_014333
Putative ribosome biogenesis protein C8F11.04.
   
 
 0.968
Hypma_011821
Uncharacterized protein.
   
 
 0.967
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.