STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUB2ATP-dependent RNA helicase SUB2. (437 aa)    
Predicted Functional Partners:
mlo3_1
mRNA export protein mlo3.
   
 0.996
mlo3_0
mRNA export protein mlo3.
   
 0.989
alyref-a
THO complex subunit 4-A.
   
 0.987
FAL1
ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family.
  
0.972
rbm8a
RNA-binding protein 8A.
   
 0.966
THOC5
THO complex subunit 5.
   
 0.966
THO1
THO complex subunit 1.
   
 0.964
thoc7
THO complex subunit 7.
   
 0.957
DHX35
Putative ATP-dependent RNA helicase DHX35.
    
 0.950
prp22
Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22.
    
 0.950
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.