STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_001476Putative 30S ribosomal protein S17P-like. (1111 aa)    
Predicted Functional Partners:
ADO2
Adagio protein 2.
   
 0.894
Uchl5_1
Ubiquitin carboxyl-terminal hydrolase isozyme L5.
    
 0.749
Uchl5_0
Ubiquitin carboxyl-terminal hydrolase.
    
 0.749
SET3
SET domain-containing protein 3.
   
 0.651
Hypma_007886
PHD-type domain-containing protein.
   
 0.651
gsk3
Protein kinase gsk3; Belongs to the protein kinase superfamily.
    
 0.551
MDM34
Mitochondrial distribution and morphology protein 34; Component of the ERMES/MDM complex, which serves as a molecular tether to connect the endoplasmic reticulum (ER) and mitochondria. Components of this complex are involved in the control of mitochondrial shape and protein biogenesis, and function in nonvesicular lipid trafficking between the ER and mitochondria. MDM34 is required for the interaction of the ER-resident membrane protein MMM1 and the outer mitochondrial membrane-resident beta-barrel protein MDM10.
   
   0.511
cka_0
Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.
   
   0.511
cka_1
Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.
   
   0.511
SLT11
Pre-mRNA-splicing factor SLT11.
     
 0.505
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.