STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_005722Uncharacterized protein. (543 aa)    
Predicted Functional Partners:
rplF
50S ribosomal protein L6; Belongs to the universal ribosomal protein uL6 family.
  
 0.986
MRPL23
54S ribosomal protein L23, mitochondrial.
  
 0.986
tef3
Elongation factor 3.
   
 
 0.986
elf1
mRNA export factor elf1.
   
 
 0.986
mrpl22
54S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
  
 0.985
rplO
50S ribosomal protein L15.
  
 0.984
rplC
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.984
rpmJ
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.983
MRPS9
37S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.982
RPS16-1
30S ribosomal protein S16-1, chloroplastic.
   
 
 0.982
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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