Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Hypma_006924 | Hypma_013319 | A0A369JYM0 | A0A369JEP1 | RRM domain-containing protein. | Uncharacterized protein. | 0.994 |
Hypma_006924 | Hypma_015563 | A0A369JYM0 | A0A369KD30 | RRM domain-containing protein. | Uncharacterized protein. | 0.985 |
Hypma_006924 | MRTO4 | A0A369JYM0 | A0A369JBN3 | RRM domain-containing protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.991 |
Hypma_006924 | SPBC9B6.07 | A0A369JYM0 | A0A369K376 | RRM domain-containing protein. | Ribosomal RNA-processing protein 1. | 0.989 |
Hypma_006924 | WDR74 | A0A369JYM0 | A0A369JHG7 | RRM domain-containing protein. | WD repeat-containing protein 74. | 0.981 |
Hypma_006924 | YTM1 | A0A369JYM0 | A0A369J9L8 | RRM domain-containing protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.992 |
Hypma_006924 | ebp2 | A0A369JYM0 | A0A369J056 | RRM domain-containing protein. | Putative rRNA-processing protein ebp2. | 0.994 |
Hypma_006924 | mak16 | A0A369JYM0 | A0A369JML3 | RRM domain-containing protein. | Protein MAK16; Belongs to the MAK16 family. | 0.991 |
Hypma_006924 | nip7 | A0A369JYM0 | A0A369K3H0 | RRM domain-containing protein. | 60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.994 |
Hypma_006924 | rlp24 | A0A369JYM0 | A0A369JP41 | RRM domain-containing protein. | Putative ribosome biogenesis protein RLP24. | 0.991 |
Hypma_013319 | Hypma_006924 | A0A369JEP1 | A0A369JYM0 | Uncharacterized protein. | RRM domain-containing protein. | 0.994 |
Hypma_013319 | Hypma_015563 | A0A369JEP1 | A0A369KD30 | Uncharacterized protein. | Uncharacterized protein. | 0.977 |
Hypma_013319 | MRTO4 | A0A369JEP1 | A0A369JBN3 | Uncharacterized protein. | Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. | 0.989 |
Hypma_013319 | SPBC9B6.07 | A0A369JEP1 | A0A369K376 | Uncharacterized protein. | Ribosomal RNA-processing protein 1. | 0.965 |
Hypma_013319 | WDR74 | A0A369JEP1 | A0A369JHG7 | Uncharacterized protein. | WD repeat-containing protein 74. | 0.975 |
Hypma_013319 | YTM1 | A0A369JEP1 | A0A369J9L8 | Uncharacterized protein. | Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.988 |
Hypma_013319 | ebp2 | A0A369JEP1 | A0A369J056 | Uncharacterized protein. | Putative rRNA-processing protein ebp2. | 0.992 |
Hypma_013319 | mak16 | A0A369JEP1 | A0A369JML3 | Uncharacterized protein. | Protein MAK16; Belongs to the MAK16 family. | 0.986 |
Hypma_013319 | nip7 | A0A369JEP1 | A0A369K3H0 | Uncharacterized protein. | 60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.988 |
Hypma_013319 | rlp24 | A0A369JEP1 | A0A369JP41 | Uncharacterized protein. | Putative ribosome biogenesis protein RLP24. | 0.984 |
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