STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_015253Protein yippee-like; Belongs to the yippee family. (110 aa)    
Predicted Functional Partners:
wdr26
WD repeat-containing protein 26.
   
 
 0.797
ranbp9
Ran-binding protein 9.
   
 
 0.772
ARMC8_1
Armadillo repeat-containing protein 8.
    
 0.646
ARMC8_0
Armadillo repeat-containing protein 8.
    
 0.646
Rmnd5a
Protein RMD5 A.
    
 
 0.631
Hypma_011541
Uncharacterized protein.
    
 
 0.631
Hypma_015612
Glucose-induced degradation protein 8.
    
 
 0.625
yycR
Putative zinc-type alcohol dehydrogenase-like protein YycR.
 
 
    0.582
ssh4_1
Protein ssh4.
   
 
 0.538
Hypma_011688
LisH domain-containing protein.
   
 
 0.538
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.