STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESD4_1Ubiquitin-like-specific protease ESD4. (550 aa)    
Predicted Functional Partners:
SMT3_1
Ubiquitin-like protein SMT3.
    
 0.738
SMT3_0
Ubiquitin-like protein SMT3.
    
 0.738
Hypma_015850
Uncharacterized protein.
    
 0.738
TEX10
Testis-expressed sequence 10 protein.
    
 0.718
Hypma_000947
ULP_PROTEASE domain-containing protein.
    
 0.715
IPI3
Pre-rRNA-processing protein IPI3.
    
 0.711
LAS1
Protein LAS1.
   
 0.696
GRC3
Polynucleotide 5'-hydroxyl-kinase GRC3.
    
 0.640
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
    
  0.631
Hypma_005430
CxC1 domain-containing protein.
 
     0.621
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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