STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ski6Exosome complex component ski6. (265 aa)    
Predicted Functional Partners:
rrp4
Exosome complex component rrp4.
 
 
 0.999
rrp40
Exosome complex component rrp40.
  
 0.998
EXOSC8
Exosome complex component RRP43.
   
 0.998
EXOSC7
Exosome complex component RRP42.
  
 0.998
Exosc5
Exosome complex component RRP46.
   
 0.998
rrp45
Exosome complex component rrp45.
   
 0.998
exosc6
Exosome complex component MTR3.
  
0.997
dis3
Exosome complex exonuclease dis3; Belongs to the RNR ribonuclease family.
   
 0.996
c1d
Nuclear nucleic acid-binding protein C1D.
   
 0.984
mtr4_1
ATP-dependent RNA helicase mtr4.
   
 0.980
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.