STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_005795BHLH domain-containing protein. (615 aa)    
Predicted Functional Partners:
crp-74
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.788
NTF2
Nuclear transport factor 2.
    
 0.767
rplA
50S ribosomal protein L1.
    
  0.675
Hypma_008093
Uncharacterized protein.
    
 0.653
rbpj
Suppressor of hairless.
    
 0.602
cbf11
Transcription factor cbf11.
    
 0.602
Hypma_016356
PAS domain-containing protein.
    
 0.587
Hypma_009903
BHLH domain-containing protein.
    
 0.587
gsk3
Protein kinase gsk3; Belongs to the protein kinase superfamily.
    
 
 0.515
pggt1b
Geranylgeranyl transferase type-1 subunit beta.
    
 
 0.510
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.