STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_005848JmjC domain-containing protein. (703 aa)    
Predicted Functional Partners:
snf5
SWI/SNF chromatin-remodeling complex subunit snf5.
    
 0.533
Hypma_013492
Uncharacterized protein.
   
  0.523
HHT2_3
Histone H3; Belongs to the histone H3 family.
    
 0.514
HHT2_4
Histone H3; Belongs to the histone H3 family.
    
 0.514
HHT2_0
Histone H3.2.
    
 0.514
H3
Histone H3.
    
 0.514
HHT2_5
Histone H3.2.
    
 0.514
snf21
Chromatin structure-remodeling complex subunit snf21.
     
 0.503
ssr2
SWI/SNF and RSC complexes subunit ssr2.
   
 
 0.500
JHD1
JmjC domain-containing histone demethylation protein 1.
     
 0.485
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.