node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH09375.1 | SDH09436.1 | SAMN04489720_0011 | SAMN04489720_0013 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities. | 0.576 |
SDH09375.1 | uvrA | SAMN04489720_0011 | SAMN04489720_0015 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.549 |
SDH09375.1 | uvrC | SAMN04489720_0011 | SAMN04489720_0014 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.577 |
SDH09375.1 | whiA | SAMN04489720_0011 | SAMN04489720_0012 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Hypothetical protein; Involved in cell division and chromosome segregation. | 0.578 |
SDH09436.1 | SDH09375.1 | SAMN04489720_0013 | SAMN04489720_0011 | UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.576 |
SDH09436.1 | uvrA | SAMN04489720_0013 | SAMN04489720_0015 | UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.765 |
SDH09436.1 | uvrC | SAMN04489720_0013 | SAMN04489720_0014 | UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.799 |
SDH09436.1 | whiA | SAMN04489720_0013 | SAMN04489720_0012 | UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities. | Hypothetical protein; Involved in cell division and chromosome segregation. | 0.912 |
SDH31899.1 | SDH90933.1 | SAMN04489720_0928 | SAMN04489720_2814 | ATP-dependent DNA helicase PcrA. | ATP-dependent DNA helicase, Rep family. | 0.909 |
SDH31899.1 | SDI04238.1 | SAMN04489720_0928 | SAMN04489720_3301 | ATP-dependent DNA helicase PcrA. | Helix-hairpin-helix domain-containing protein; Partial gene; manually curated. | 0.459 |
SDH31899.1 | ruvB | SAMN04489720_0928 | SAMN04489720_0089 | ATP-dependent DNA helicase PcrA. | Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.403 |
SDH31899.1 | uvrA | SAMN04489720_0928 | SAMN04489720_0015 | ATP-dependent DNA helicase PcrA. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.671 |
SDH31899.1 | uvrB | SAMN04489720_0928 | SAMN04489720_0023 | ATP-dependent DNA helicase PcrA. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.874 |
SDH31899.1 | uvrC | SAMN04489720_0928 | SAMN04489720_0014 | ATP-dependent DNA helicase PcrA. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.551 |
SDH90933.1 | SDH31899.1 | SAMN04489720_2814 | SAMN04489720_0928 | ATP-dependent DNA helicase, Rep family. | ATP-dependent DNA helicase PcrA. | 0.909 |
SDH90933.1 | SDI04238.1 | SAMN04489720_2814 | SAMN04489720_3301 | ATP-dependent DNA helicase, Rep family. | Helix-hairpin-helix domain-containing protein; Partial gene; manually curated. | 0.459 |
SDH90933.1 | uvrA | SAMN04489720_2814 | SAMN04489720_0015 | ATP-dependent DNA helicase, Rep family. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.601 |
SDH90933.1 | uvrB | SAMN04489720_2814 | SAMN04489720_0023 | ATP-dependent DNA helicase, Rep family. | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] | 0.865 |
SDH90933.1 | uvrC | SAMN04489720_2814 | SAMN04489720_0014 | ATP-dependent DNA helicase, Rep family. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.459 |
SDI04238.1 | SDH31899.1 | SAMN04489720_3301 | SAMN04489720_0928 | Helix-hairpin-helix domain-containing protein; Partial gene; manually curated. | ATP-dependent DNA helicase PcrA. | 0.459 |