STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH09697.1DNA-binding transcriptional regulator, GntR family. (211 aa)    
Predicted Functional Partners:
SDH99059.1
DNA-binding transcriptional regulator, GntR family.
  
     0.768
SDH27881.1
DNA-binding transcriptional regulator, GntR family.
  
     0.758
SDH86711.1
DNA-binding transcriptional regulator, GntR family.
  
     0.692
SDH09668.1
Mn2+ and Fe2+ transporters of the NRAMP family.
 
     0.655
SDH09576.1
Sensor histidine kinase inhibitor, KipI family.
 
     0.641
SDH09601.1
Uncharacterized protein YcsI, UPF0317 family; Belongs to the D-glutamate cyclase family.
 
     0.578
pxpA
UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.543
SDH09545.1
acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein.
       0.534
SDH74156.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.516
SDH12182.1
Methyltransferase small domain-containing protein; Belongs to the methyltransferase superfamily.
    
   0.430
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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