STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH13773.1Peroxiredoxin. (152 aa)    
Predicted Functional Partners:
SDH13743.1
Predicted arabinose efflux permease, MFS family.
       0.773
SDH10371.1
Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
  
    0.677
SDH13804.1
Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
    0.519
SDH13833.1
PucR C-terminal helix-turn-helix domain-containing protein.
       0.482
SDH55339.1
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.433
SDH94733.1
Putative thioredoxin.
  
 
 0.433
SDH13860.1
[acyl-carrier-protein] S-malonyltransferase.
       0.412
SDH90252.1
ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.408
SDH09854.1
SSU ribosomal protein S1P.
   
   0.402
SDH58939.1
Cytochrome c biogenesis protein CcdA.
  
  
 0.402
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.