STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH14253.1acyl-CoA thioester hydrolase. (159 aa)    
Predicted Functional Partners:
SDH14314.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
   
  0.853
SDH14284.1
Alcohol dehydrogenase.
       0.773
SDH12153.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.744
SDH13860.1
[acyl-carrier-protein] S-malonyltransferase.
   
 0.738
SDH14349.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 
  0.681
SDH14379.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.671
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 0.670
secA
Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
   
   0.574
SDH14411.1
MFS transporter, MHS family, alpha-ketoglutarate permease.
       0.566
SDI00992.1
NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family.
 
 
  0.508
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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