Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDH17448.1 | SDH17508.1 | SAMN04489720_0293 | SAMN04489720_0295 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | DivIVA domain-containing protein. | 0.833 |
| SDH17448.1 | SDH17537.1 | SAMN04489720_0293 | SAMN04489720_0296 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | YggT family protein. | 0.615 |
| SDH17448.1 | SDH17606.1 | SAMN04489720_0293 | SAMN04489720_0298 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.560 |
| SDH17448.1 | SDH17660.1 | SAMN04489720_0293 | SAMN04489720_0300 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Cell division protein FtsQ. | 0.414 |
| SDH17448.1 | ftsZ | SAMN04489720_0293 | SAMN04489720_0299 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.572 |
| SDH17448.1 | lspA | SAMN04489720_0293 | SAMN04489720_0294 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.846 |
| SDH17448.1 | sepF | SAMN04489720_0293 | SAMN04489720_0297 | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.615 |
| SDH17508.1 | SDH17448.1 | SAMN04489720_0295 | SAMN04489720_0293 | DivIVA domain-containing protein. | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.833 |
| SDH17508.1 | SDH17537.1 | SAMN04489720_0295 | SAMN04489720_0296 | DivIVA domain-containing protein. | YggT family protein. | 0.786 |
| SDH17508.1 | SDH17606.1 | SAMN04489720_0295 | SAMN04489720_0298 | DivIVA domain-containing protein. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.855 |
| SDH17508.1 | SDH17660.1 | SAMN04489720_0295 | SAMN04489720_0300 | DivIVA domain-containing protein. | Cell division protein FtsQ. | 0.824 |
| SDH17508.1 | SDH17915.1 | SAMN04489720_0295 | SAMN04489720_0308 | DivIVA domain-containing protein. | Cell division protein FtsI (penicillin-binding protein 3). | 0.793 |
| SDH17508.1 | SDH77575.1 | SAMN04489720_0295 | SAMN04489720_2348 | DivIVA domain-containing protein. | Membrane carboxypeptidase (penicillin-binding protein). | 0.842 |
| SDH17508.1 | SDH79708.1 | SAMN04489720_0295 | SAMN04489720_2421 | DivIVA domain-containing protein. | Membrane carboxypeptidase (penicillin-binding protein). | 0.914 |
| SDH17508.1 | ftsZ | SAMN04489720_0295 | SAMN04489720_0299 | DivIVA domain-containing protein. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.865 |
| SDH17508.1 | lspA | SAMN04489720_0295 | SAMN04489720_0294 | DivIVA domain-containing protein. | Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. | 0.824 |
| SDH17508.1 | sepF | SAMN04489720_0295 | SAMN04489720_0297 | DivIVA domain-containing protein. | Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.855 |
| SDH17537.1 | SDH17448.1 | SAMN04489720_0296 | SAMN04489720_0293 | YggT family protein. | Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.615 |
| SDH17537.1 | SDH17508.1 | SAMN04489720_0296 | SAMN04489720_0295 | YggT family protein. | DivIVA domain-containing protein. | 0.786 |
| SDH17537.1 | SDH17606.1 | SAMN04489720_0296 | SAMN04489720_0298 | YggT family protein. | Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.931 |
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