STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH18125.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
SDH91649.1
Iron (metal) dependent repressor, DtxR family.
   
    0.690
SDH18156.1
Serine/threonine protein kinase.
     
 0.685
SDH93907.1
DNA-binding transcriptional regulator, HxlR family.
   
    0.666
SDI02726.1
NAD-dependent protein deacetylase, SIR2 family.
   
    0.666
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.
  
     0.664
SDI00092.1
Protein of unknown function.
  
     0.634
crgA
Uncharacterised protein family (UPF0233); Involved in cell division; Belongs to the CrgA family.
  
     0.629
SDH18095.1
Restriction endonuclease.
       0.625
SDH12482.1
Protein of unknown function.
  
     0.621
SDH17508.1
DivIVA domain-containing protein.
  
     0.600
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.