STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH18387.1Threonine 3-dehydrogenase. (347 aa)    
Predicted Functional Partners:
kbl
2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.
 
 
 0.955
SDH13411.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
  
 
  0.844
SDH84290.1
L-threonine ammonia-lyase.
   
 
  0.803
SDH18417.1
Sugar phosphate isomerase/epimerase.
    
  0.775
SDH18353.1
Uncharacterized conserved protein YgbK, DUF1537 family.
  
    0.676
SDH18321.1
Ribulose-bisphosphate carboxylase large chain; Belongs to the RuBisCO large chain family.
       0.675
SDH30820.1
PTS system, sucrose-specific IIC component.
   
 
 0.585
SDH54602.1
PTS system N-acetylglucosamine-specific IIA component, Glc family /PTS system N-acetylglucosamine-specific IIB component, Glc family.
   
 
 0.585
SDH18459.1
Long-chain acyl-CoA synthetase.
  
    0.546
SDH48537.1
Alcohol dehydrogenase, propanol-preferring.
  
 
0.524
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.