STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH19896.1Predicted homoserine dehydrogenase, contains C-terminal SAF domain. (453 aa)    
Predicted Functional Partners:
SDH19944.1
Uncharacterized conserved protein YgbK, DUF1537 family.
 
     0.850
SDH19973.1
L-fuculose-phosphate aldolase.
 
    0.811
SDH19868.1
Na+/H+ antiporter NhaD.
 
     0.664
SDH20005.1
DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family.
 
     0.585
SDH18353.1
Uncharacterized conserved protein YgbK, DUF1537 family.
 
     0.508
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
     
  0.499
asd
Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
     
  0.499
SDH30258.1
PTS system, glucitol/sorbitol-specific IIC component.
 
    0.469
SDH30159.1
DNA-binding transcriptional regulator LsrR, DeoR family.
 
     0.454
SDH42844.1
Protein of unknown function.
  
     0.452
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.