STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH20228.1ABC-type polysaccharide/polyol phosphate export permease. (265 aa)    
Predicted Functional Partners:
SDH20257.1
ABC-2 type transport system ATP-binding protein.
 
 0.976
SDH68290.1
ABC-2 type transport system ATP-binding protein.
 
 0.897
SDH68323.1
ABC-2 type transport system permease protein.
 
 
0.897
SDH20283.1
MbtH protein.
       0.787
SDH20199.1
4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
       0.773
SDH42170.1
Nitroreductase.
 
    0.730
SDI03340.1
ABC-2 type transport system ATP-binding protein.
 
 0.710
SDH64266.1
ABC-2 type transport system ATP-binding protein.
 
 0.688
SDH78412.1
Lipooligosaccharide transport system ATP-binding protein.
 
 0.676
SDH20315.1
Amino acid adenylation domain-containing protein.
  
  
 0.660
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
Server load: medium (68%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.