STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH23872.1Protein of unknown function. (301 aa)    
Predicted Functional Partners:
SDH76886.1
Cystathionine beta-synthase.
    
  0.664
SDH32614.1
Hypothetical protein.
  
     0.661
SDH10259.1
Glutamate synthase (NADH) large subunit.
   
    0.634
SDH23698.1
Ca-activated chloride channel family protein.
 
     0.538
SDH23726.1
Von Willebrand factor type A domain-containing protein.
 
     0.515
SDH23675.1
Hypothetical protein.
 
     0.513
SDH83847.1
HNH endonuclease.
  
     0.473
SDH99483.1
Protein of unknown function.
  
     0.471
SDH97316.1
Protein of unknown function.
  
     0.450
SDH23740.1
Hypothetical protein.
       0.444
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.