STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH26478.1DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. (216 aa)    
Predicted Functional Partners:
SDH26446.1
Signal transduction histidine kinase.
  0.975
SDH38140.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.906
SDH39968.1
Signal transduction histidine kinase.
 
  0.897
SDH67025.1
Signal transduction histidine kinase.
 
  0.895
SDI03404.1
Signal transduction histidine kinase.
  0.886
SDH86010.1
Signal transduction histidine kinase.
  
  0.884
SDH15257.1
Signal transduction histidine kinase.
 
  0.883
SDH76068.1
Signal transduction histidine kinase.
  
  0.777
SDH26391.1
ABC-2 type transport system ATP-binding protein.
       0.752
SDH26418.1
ABC-2 type transport system permease protein.
       0.752
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.