STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH26759.1NitT/TauT family transport system ATP-binding protein. (268 aa)    
Predicted Functional Partners:
SDH26730.1
NitT/TauT family transport system permease protein.
 
 0.999
SDH26709.1
NitT/TauT family transport system substrate-binding protein.
 
 
 0.994
SDH26783.1
NitT/TauT family transport system permease protein.
 
 
 0.990
SDH70059.1
Sulfonate transport system permease protein.
 
 
 0.979
SDH70029.1
Sulfonate transport system substrate-binding protein.
  
 
 0.960
SDH26812.1
F420-dependent oxidoreductase, CPS_4043 family.
 
 
  0.922
SDH26837.1
Dihydropyrimidinase.
 
     0.882
SDH26860.1
N-carbamoylputrescine amidase.
 
     0.798
SDH41992.1
FMN reductase.
  
 
  0.720
SDH89722.1
FMN reductase.
  
 
  0.720
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.