STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH28492.1Leader peptidase (prepilin peptidase) / N-methyltransferase. (184 aa)    
Predicted Functional Partners:
SDH15859.1
Competence protein ComEC.
  
  
 0.781
SDH94223.1
DNA protecting protein DprA.
  
  
 0.720
SDH15951.1
Competence protein ComEA.
   
  
 0.681
SDH28513.1
Hypothetical protein.
       0.618
SDH36107.1
Proteins of 100 residues with WXG; Belongs to the WXG100 family.
  
     0.526
SDH36303.1
Proteins of 100 residues with WXG.
  
     0.526
SDH28475.1
D-methionine transport system substrate-binding protein.
       0.459
SDH28534.1
PhoH-like ATPase.
       0.453
SDI01233.1
Hypothetical protein.
  
     0.415
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.