STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH29654.1O-antigen ligase. (450 aa)    
Predicted Functional Partners:
SDH29594.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.783
SDH29558.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
       0.773
SDH29572.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
       0.773
SDH29588.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
       0.773
SDH29607.1
UDP-glucose 4-epimerase.
       0.773
SDH29617.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
       0.773
SDH29630.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
       0.773
SDH29644.1
Hypothetical protein.
       0.773
SDH29665.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.773
SDH29536.1
Acetyltransferase involved in cellulose biosynthesis, CelD/BcsL family.
       0.732
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.