STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH29979.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
SDH29990.1
Helicase conserved C-terminal domain-containing protein.
       0.783
SDH29997.1
DNA excision repair protein ERCC-3.
       0.668
SDH29959.1
Protein of unknown function.
       0.556
SDH29971.1
Cold-shock DNA-binding protein family.
       0.556
SDH30008.1
Two-component system, OmpR family, response regulator.
       0.482
SDH30015.1
Two-component system, OmpR family, sensor kinase.
       0.482
SDH30026.1
WXG100 family type VII secretion target; Belongs to the WXG100 family.
       0.406
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.