STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH30224.1Predicted homoserine dehydrogenase, contains C-terminal SAF domain. (447 aa)    
Predicted Functional Partners:
SDH30243.1
PTS system, glucitol/sorbitol-specific IIA component.
 
    0.872
SDH30258.1
PTS system, glucitol/sorbitol-specific IIC component.
 
    0.865
SDH30252.1
PTS system, glucitol/sorbitol-specific IIC component.
 
    0.853
SDH30219.1
Pyruvate dehydrogenase E1 component alpha subunit.
 
     0.821
SDH30209.1
Pyruvate dehydrogenase E1 component beta subunit.
       0.778
SDH30199.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
       0.773
SDH30190.1
PTS system IIC component, Gat family.
 
     0.715
SDH30175.1
PTS system IIA component, Gat family.
  
     0.678
SDH30184.1
PTS system, galactitol-specific IIB component.
  
     0.667
SDH30159.1
DNA-binding transcriptional regulator LsrR, DeoR family.
 
     0.612
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.