STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH30252.1PTS system, glucitol/sorbitol-specific IIC component. (351 aa)    
Predicted Functional Partners:
SDH30258.1
PTS system, glucitol/sorbitol-specific IIC component.
 
 
 0.999
SDH30243.1
PTS system, glucitol/sorbitol-specific IIA component.
 
 
 0.998
SDH30234.1
Glucitol operon activator protein (GutM).
  
  
 0.890
SDH30224.1
Predicted homoserine dehydrogenase, contains C-terminal SAF domain.
 
    0.853
SDH34018.1
Phosphocarrier protein HPr.
    
  0.846
SDH33975.1
PTS system D-mannitol-specific IIA component, Fru family /PTS system D-mannitol-specific IIB component, Fru family /PTS system D-mannitol-specific IIC component, Fru family.
 
  
  0.790
SDH30190.1
PTS system IIC component, Gat family.
 
     0.776
SDH30175.1
PTS system IIA component, Gat family.
 
    0.773
SDH30184.1
PTS system, galactitol-specific IIB component.
  
     0.765
SDH30159.1
DNA-binding transcriptional regulator LsrR, DeoR family.
 
     0.620
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.