STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH30327.1Hypothetical protein. (278 aa)    
Predicted Functional Partners:
SDH29617.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
  
 
  0.754
gpmA
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.643
SDH30336.1
Permease of the drug/metabolite transporter (DMT) superfamily.
  
   0.630
crgA
Uncharacterised protein family (UPF0233); Involved in cell division; Belongs to the CrgA family.
  
     0.506
SDH30350.1
Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands.
 
     0.450
SDH18125.1
Hypothetical protein.
  
     0.436
SDH96419.1
Hypothetical protein.
  
     0.431
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.
  
    0.424
SDH87291.1
Peptidase family M1.
 
     0.410
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.