STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH30344.1Hypothetical protein; Belongs to the GcvT family. (347 aa)    
Predicted Functional Partners:
SDH30350.1
Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands.
 
    0.888
SDH30356.1
Hypothetical protein.
       0.783
SDH30365.1
Hypothetical protein.
       0.695
SDI00151.1
Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family.
 
 
 0.690
SDH54244.1
Fe-S cluster assembly iron-binding protein IscA.
  
 
 0.580
SDH30379.1
Mycothiol synthase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
       0.554
SDH32967.1
Hypothetical protein.
  
     0.552
SDH30373.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
       0.537
SDH77961.1
DNA polymerase III, delta prime subunit.
  
     0.509
SDH23896.1
RIP metalloprotease RseP.
  
     0.491
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.