Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH30344.1 | SDH30350.1 | SAMN04489720_0826 | SAMN04489720_0827 | Hypothetical protein; Belongs to the GcvT family. | Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands. | 0.888 |
SDH30344.1 | SDH30356.1 | SAMN04489720_0826 | SAMN04489720_0828 | Hypothetical protein; Belongs to the GcvT family. | Hypothetical protein. | 0.783 |
SDH30344.1 | SDH30365.1 | SAMN04489720_0826 | SAMN04489720_0829 | Hypothetical protein; Belongs to the GcvT family. | Hypothetical protein. | 0.695 |
SDH30344.1 | SDH30373.1 | SAMN04489720_0826 | SAMN04489720_0830 | Hypothetical protein; Belongs to the GcvT family. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.537 |
SDH30344.1 | SDH30379.1 | SAMN04489720_0826 | SAMN04489720_0831 | Hypothetical protein; Belongs to the GcvT family. | Mycothiol synthase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.554 |
SDH30344.1 | SDH30393.1 | SAMN04489720_0826 | SAMN04489720_0833 | Hypothetical protein; Belongs to the GcvT family. | 8-oxo-dGTP diphosphatase. | 0.488 |
SDH30344.1 | ppk | SAMN04489720_0826 | SAMN04489720_0832 | Hypothetical protein; Belongs to the GcvT family. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.482 |
SDH30350.1 | SDH30344.1 | SAMN04489720_0827 | SAMN04489720_0826 | Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands. | Hypothetical protein; Belongs to the GcvT family. | 0.888 |
SDH30350.1 | SDH30356.1 | SAMN04489720_0827 | SAMN04489720_0828 | Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands. | Hypothetical protein. | 0.783 |
SDH30350.1 | SDH30365.1 | SAMN04489720_0827 | SAMN04489720_0829 | Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands. | Hypothetical protein. | 0.691 |
SDH30350.1 | SDH30373.1 | SAMN04489720_0827 | SAMN04489720_0830 | Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.531 |
SDH30350.1 | SDH30379.1 | SAMN04489720_0827 | SAMN04489720_0831 | Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands. | Mycothiol synthase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.558 |
SDH30350.1 | SDH30393.1 | SAMN04489720_0827 | SAMN04489720_0833 | Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands. | 8-oxo-dGTP diphosphatase. | 0.493 |
SDH30350.1 | ppk | SAMN04489720_0827 | SAMN04489720_0832 | Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.484 |
SDH30356.1 | SDH30344.1 | SAMN04489720_0828 | SAMN04489720_0826 | Hypothetical protein. | Hypothetical protein; Belongs to the GcvT family. | 0.783 |
SDH30356.1 | SDH30350.1 | SAMN04489720_0828 | SAMN04489720_0827 | Hypothetical protein. | Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands. | 0.783 |
SDH30356.1 | SDH30365.1 | SAMN04489720_0828 | SAMN04489720_0829 | Hypothetical protein. | Hypothetical protein. | 0.634 |
SDH30356.1 | SDH30373.1 | SAMN04489720_0828 | SAMN04489720_0830 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.467 |
SDH30356.1 | SDH30379.1 | SAMN04489720_0828 | SAMN04489720_0831 | Hypothetical protein. | Mycothiol synthase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.467 |
SDH30365.1 | SDH30344.1 | SAMN04489720_0829 | SAMN04489720_0826 | Hypothetical protein. | Hypothetical protein; Belongs to the GcvT family. | 0.695 |
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