STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH30560.1Ferredoxin-NADP reductase. (512 aa)    
Predicted Functional Partners:
SDH30571.1
FMN-binding domain-containing protein.
 
     0.954
SDH30563.1
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
     0.952
SDH64934.1
L-proline dehydrogenase.
  
 
 0.805
SDH74920.1
L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.805
SDH48164.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
  
 
 0.711
SDH59812.1
Hypothetical protein.
  
     0.614
SDH48681.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
  
 
 0.593
SDH95883.1
Fatty acid desaturase.
  
 
 0.591
SDH24935.1
Hypothetical protein.
  
     0.588
SDH59838.1
Hypothetical protein.
  
     0.547
Your Current Organism:
Agrococcus jejuensis
NCBI taxonomy Id: 399736
Other names: A. jejuensis, Agrococcus jejuensis Lee 2008, DSM 22002, JCM 14256, KCTC 19198, strain SSW1-48
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